STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
phoB_3Phosphate regulon transcriptional regulatory protein PhoB. (413 aa)    
Predicted Functional Partners:
OOO01122.1
Putative signaling protein.
   
 0.925
luxQ_1
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
  
 0.924
fixL
Sensor protein FixL.
   
 0.918
rcsC
Sensor histidine kinase RcsC.
 
 
 0.907
cysG
Siroheme synthase; Multifunctional enzyme that catalyzes the SAM-dependent methylations of uroporphyrinogen III at position C-2 and C-7 to form precorrin-2 via precorrin-1. Then it catalyzes the NAD-dependent ring dehydrogenation of precorrin-2 to yield sirohydrochlorin. Finally, it catalyzes the ferrochelation of sirohydrochlorin to yield siroheme. Belongs to the precorrin methyltransferase family. In the N-terminal section; belongs to the precorrin-2 dehydrogenase / sirohydrochlorin ferrochelatase family.
    
 0.905
hupR1
Hydrogenase transcriptional regulatory protein hupR1.
    
 0.895
tctD
Transcriptional regulatory protein tctD.
 
  
 0.889
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.887
OOO02957.1
Hypothetical protein.
    
 0.883
luxQ_3
Autoinducer 2 sensor kinase/phosphatase LuxQ.
    
 0.873
Your Current Organism:
Chromatiales bacterium USCgTaylor
NCBI taxonomy Id: 1934255
Other names: C. bacterium USCg_Taylor, Chromatiales bacterium USCg_Taylor
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