STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC16532.1GTPase; Derived by automated computational analysis using gene prediction method: Protein Homology. (471 aa)    
Predicted Functional Partners:
OUC12017.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.900
OUC12226.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.879
OUC15235.1
Bile acid beta-glucosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.855
OUC13963.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.854
OUC12381.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.807
OUC14874.1
Molecular chaperone HtpG; Molecular chaperone. Has ATPase activity.
   
 0.774
OUC13605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.688
OUC15658.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: GeneMarkS+.
  
     0.674
OUC13481.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.670
glgB
1,4-alpha-glucan branching enzyme; Catalyzes the formation of the alpha-1,6-glucosidic linkages in glycogen by scission of a 1,4-alpha-linked oligosaccharide from growing alpha-1,4-glucan chains and the subsequent attachment of the oligosaccharide to the alpha-1,6 position; Belongs to the glycosyl hydrolase 13 family. GlgB subfamily.
    
   0.651
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.