STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC15848.1Photosystem I reaction center subunit XII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family. (289 aa)    
Predicted Functional Partners:
OUC16576.1
Phycocyanin subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
OUC13568.1
Phycobilisome linker polypeptide; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.999
OUC15714.1
Photosystem I reaction center subunit XII; Rod linker protein, associated with allophycocyanin. Linker polypeptides determine the state of aggregation and the location of the disk-shaped phycobiliprotein units within the phycobilisome and modulate their spectroscopic properties in order to mediate a directed and optimal energy transfer.
  
 
 0.992
OUC15715.1
Allophycocyanin subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.990
OUC15716.1
Allophycocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.990
OUC15096.1
Allophycocyanin subunit beta; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.990
OUC14217.1
Allophycocyanin; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 
 0.990
OUC15850.1
Phycocyanin subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.987
OUC16575.1
Phycocyanin subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
OUC13565.1
Phycocyanin subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.981
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.