STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC15348.1Dihydrobiliverdin:ferredoxin oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the HY2 family. (241 aa)    
Predicted Functional Partners:
pebB
Phycoerythrobilin:ferredoxin oxidoreductase; Catalyzes the two-electron reduction of the C2 and C3(1) diene system of 15,16-dihydrobiliverdin; Belongs to the HY2 family.
 
  
0.961
cpcS-3
Phycobiliprotein lyase; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
 
   
 0.887
OUC16079.1
Heme oxygenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
 0.821
OUC15327.1
Bleomycin hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.819
OUC15349.1
Phycocyanin operon protein Y; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.818
OUC15314.1
Photosystem I reaction center subunit XII; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the phycobilisome linker protein family.
  
   
 0.817
OUC15326.1
Bleomycin hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.814
cpcT
Chorismate-binding protein; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.799
cpcS-4
Phycobiliprotein lyase; Covalently attaches a chromophore to Cys residue(s) of phycobiliproteins.
  
   
 0.782
OUC16437.1
Phycobilisome protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
   
 0.780
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
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