STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC15099.1Gas vesicle protein K; Derived by automated computational analysis using gene prediction method: Protein Homology. (143 aa)    
Predicted Functional Partners:
OUC15083.1
Gas vesicle protein; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth.
 
   
 0.903
OUC15084.1
Gas vesicle protein GvpN; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.889
gvpA
Gas vesicle synthesis protein GvpA; Gas vesicles are small, hollow, gas filled protein structures that are found in several microbial planktonic microorganisms. They allow the positioning of the organism at the favorable depth for growth. GvpA type proteins form the essential core of the structure.
 
   
 0.883
OUC15183.1
Protein gvpF/L; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
 0.841
OUC15088.1
AAA family ATPase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the AAA ATPase family.
 
     0.736
OUC12587.1
Haloacid dehalogenase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
      0.630
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.