STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC14968.1ABC transporter ATP-binding protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (247 aa)    
Predicted Functional Partners:
OUC13516.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.986
OUC12291.1
Efflux transporter periplasmic adaptor subunit; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the membrane fusion protein (MFP) (TC 8.A.1) family.
  
 0.982
OUC15787.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.968
OUC13415.1
Phosphatase; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 
0.947
OUC13838.1
Peptide ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
   
  0.915
OUC14501.1
ABC transporter permease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.911
OUC13343.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
    
0.908
OUC14469.1
ABC transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.867
OUC14468.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.813
OUC13868.1
Acriflavine resistance protein B; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the resistance-nodulation-cell division (RND) (TC 2.A.6) family.
   
 0.652
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
Server load: low (14%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.