STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC14033.1Oxidoreductase; Derived by automated computational analysis using gene prediction method: Protein Homology. (261 aa)    
Predicted Functional Partners:
OUC14032.1
Ni/Fe hydrogenase subunit alpha; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.999
OUC16706.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.997
OUC14030.1
Hydrogenase maturation protease; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
 0.961
OUC16373.1
Heterodisulfide reductase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 0.934
OUC16416.1
Ni/Fe hydrogenase subunit gamma; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.930
OUC13510.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
 0.913
OUC16418.1
Sulfite reductase subunit A; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  
 0.881
OUC14034.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.817
OUC16417.1
Crp/Fnr family transcriptional regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
     0.778
OUC14177.1
Bifunctional acetaldehyde-CoA/alcohol dehydrogenase; Derived by automated computational analysis using gene prediction method: Protein Homology; In the C-terminal section; belongs to the iron-containing alcohol dehydrogenase family.
    
  0.710
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.