STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC13249.1Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology. (524 aa)    
Predicted Functional Partners:
B0A82_01250
Hypothetical protein; Frameshifted; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.612
OUC15855.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.589
OUC15301.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.586
gcvP
Glycine dehydrogenase (aminomethyl-transferring); The glycine cleavage system catalyzes the degradation of glycine. The P protein binds the alpha-amino group of glycine through its pyridoxal phosphate cofactor; CO(2) is released and the remaining methylamine moiety is then transferred to the lipoamide cofactor of the H protein; Belongs to the GcvP family.
   
    0.583
OUC15703.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.518
OUC12383.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.474
OUC15532.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.452
OUC14914.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.442
OUC12740.1
DUF1868 domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.440
OUC12396.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
     0.419
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.