OUC12818.1 protein (Alkalinema sp. CACIAM) - STRING interaction network

Nodes:

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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.

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query proteins and first shell of interactors

white nodes:
second shell of interactors

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proteins of unknown 3D structure

filled nodes:
a 3D structure is known or predicted

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Edges represent protein-protein associations

associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.

Known Interactions

from curated databases

experimentally determined

Predicted Interactions

gene neighborhood

gene fusions

gene co-occurrence

Others

textmining

co-expression

protein homology

Your Input:

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Gene Fusion

Cooccurrence

Coexpression

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[Homology]

Score

OUC12818.1

DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (251 aa)

Predicted Functional Partners:

OUC15543.1

0.978

OUC13605.1

0.968

OUC16344.1

0.967

OUC14827.1

0.964

OUC15928.1

0.943

OUC11968.1

0.932

OUC13145.1

0.928

OUC12961.1

0.928

OUC13482.1

0.920

OUC13108.1

0.920

Your Current Organism:

Alkalinema sp. CACIAM

NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d

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structured XML interaction data, according to the 'PSI-MI' data standard

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a tab-delimited file describing the names, domains and descriptions of proteins in your network

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Browse interactions in tabular form:

node1	node2	node1 accession	node2 accession	node1 annotation	node2 annotation	score
OUC11968.1	OUC12818.1	B0A82_25025	B0A82_20820	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
OUC11968.1	OUC12961.1	B0A82_25025	B0A82_19630	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.998
OUC11968.1	OUC13108.1	B0A82_25025	B0A82_19070	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC13145.1	B0A82_25025	B0A82_18530	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC13482.1	B0A82_25025	B0A82_16925	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC13605.1	B0A82_25025	B0A82_16260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC14827.1	B0A82_25025	B0A82_10950	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC15543.1	B0A82_25025	B0A82_06260	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC15928.1	B0A82_25025	B0A82_04000	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC11968.1	OUC16344.1	B0A82_25025	B0A82_02145	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.999
OUC12818.1	OUC11968.1	B0A82_20820	B0A82_25025	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.932
OUC12818.1	OUC12961.1	B0A82_20820	B0A82_19630	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
OUC12818.1	OUC13108.1	B0A82_20820	B0A82_19070	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
OUC12818.1	OUC13145.1	B0A82_20820	B0A82_18530	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.928
OUC12818.1	OUC13482.1	B0A82_20820	B0A82_16925	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.920
OUC12818.1	OUC13605.1	B0A82_20820	B0A82_16260	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.968
OUC12818.1	OUC14827.1	B0A82_20820	B0A82_10950	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.964
OUC12818.1	OUC15543.1	B0A82_20820	B0A82_06260	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.978
OUC12818.1	OUC15928.1	B0A82_20820	B0A82_04000	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.943
OUC12818.1	OUC16344.1	B0A82_20820	B0A82_02145	DNA-binding response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology.	Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.	0.967