STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
OUC12176.1Two-component system response regulator; Derived by automated computational analysis using gene prediction method: Protein Homology. (346 aa)    
Predicted Functional Partners:
OUC12332.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.982
OUC14503.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 0.981
OUC16426.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
  0.977
OUC16344.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.974
OUC14827.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
0.973
OUC14211.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.972
OUC13605.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.969
OUC15543.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
0.965
OUC16472.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 0.960
OUC12854.1
GGDEF domain-containing protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
 
 
  0.960
Your Current Organism:
Alkalinema sp. CACIAM
NCBI taxonomy Id: 1934309
Other names: A. sp. CACIAM 70d, Alkalinema sp. CACIAM 70d
Server load: low (4%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.