STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725495_01509Unannotated protein. (110 aa)    
Predicted Functional Partners:
GCA_000725495_02620
Unannotated protein.
 
  
  0.720
GCA_000725495_02335
Unannotated protein.
  
 
 0.698
GCA_000725495_01966
Unannotated protein.
 
 
  0.486
GCA_000725495_01507
Unannotated protein.
       0.470
GCA_000725495_01508
Unannotated protein.
       0.470
GCA_000725495_01178
Unannotated protein.
  
 
 0.466
GCA_000725495_01741
Unannotated protein.
  
 
 0.466
GCA_000725495_06517
Unannotated protein.
  
 
 0.466
GCA_000725495_04463
Unannotated protein.
 
 
  0.460
GCA_000725495_06488
Unannotated protein.
  
     0.448
Your Current Organism:
Streptomyces aureus
NCBI taxonomy Id: 193461
Other names: DSM 41785, JCM 12605, NBRC 100912, NCIMB 13927, S. aureus, Streptomyces aureus Manfio et al. 2003, strain B7319
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.