STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_000725495_04040Unannotated protein. (420 aa)    
Predicted Functional Partners:
GCA_000725495_04036
Unannotated protein.
       0.617
GCA_000725495_04037
Unannotated protein.
       0.617
GCA_000725495_04038
Unannotated protein.
       0.617
GCA_000725495_04039
Unannotated protein.
       0.617
GCA_000725495_05345
Unannotated protein.
  
     0.609
GCA_000725495_06253
Unannotated protein.
  
     0.545
GCA_000725495_04041
Unannotated protein.
  
    0.517
GCA_000725495_04042
Unannotated protein.
       0.513
GCA_000725495_02722
Unannotated protein.
    
 0.486
GCA_000725495_05284
Unannotated protein.
  
     0.440
Your Current Organism:
Streptomyces aureus
NCBI taxonomy Id: 193461
Other names: DSM 41785, JCM 12605, NBRC 100912, NCIMB 13927, S. aureus, Streptomyces aureus Manfio et al. 2003, strain B7319
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.