STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQU65127.1Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology. (1040 aa)    
Predicted Functional Partners:
AQU69991.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.903
AQU65857.1
Alpha-mannosidase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 
0.902
BBN63_01445
TetR family transcriptional regulator; Incomplete; partial on complete genome; missing stop; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.776
AQU65126.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.773
galK
Galactokinase; Catalyzes the transfer of the gamma-phosphate of ATP to D- galactose to form alpha-D-galactose-1-phosphate (Gal-1-P). Belongs to the GHMP kinase family. GalK subfamily.
  
    0.627
AQU68198.1
PTS lactose transporter subunit IIC; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.600
AQU68375.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.590
AQU65820.1
4-diphosphocytidyl-2C-methyl-D-erythritol synthase; Derived by automated computational analysis using gene prediction method: Protein Homology.
   
    0.564
AQU70560.1
Sugar kinase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
    0.549
AQU70047.1
mucin-5B; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.545
Your Current Organism:
Streptomyces niveus
NCBI taxonomy Id: 193462
Other names: ATCC 19793, ATCC 23965 [[Streptomyces spheroides]], BCRC 11514, BCRC 11559 [[Streptomyces spheroides]], CBS 491.62 [[Streptomyces spheroides]], CBS 545.68, CBS 948.68 [[Streptomyces spheroides]], CCUG 11108, DSM 40088, DSM 40292 [[Streptomyces spheroides]], DSM 41788 [[Streptomyces laceyi]], IMET 43503, ISP 5088, ISP 5292 [[Streptomyces spheroides]], JCM 12606 [[Streptomyces laceyi]], JCM 4251, JCM 4252 [[Streptomyces spheroides]], JCM 4599, JCM 4670 [[Streptomyces spheroides]], LMG 19392 [[Streptomyces spheroides]], LMG 19395, LMG 5980, LMG:19392 [[Streptomyces spheroides]], LMG:19395, LMG:5980, NBRC 100783 [[Streptomyces laceyi]], NBRC 12804, NBRC 12917 [[Streptomyces spheroides]], NCIMB 11891 [[Streptomyces spheroides]], NCIMB 13928 [[Streptomyces laceyi]], NCIMB 9219, NRRL 2449 [[Streptomyces spheroides]], NRRL 2466, NRRL B-24638 [[Streptomyces laceyi]], NRRL-ISP 5088, NRRL-ISP 5292 [[Streptomyces spheroides]], RIA 700 [[Streptomyces spheroides]], S. niveus, Streptomyces laceyi, Streptomyces laceyi Manfio et al. 2003, Streptomyces spheroides, UNIQEM 179, strain C7654 [[Streptomyces laceyi]]
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