STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ARF60752.1HIT family hydrolase; Derived by automated computational analysis using gene prediction method: Protein Homology. (191 aa)    
Predicted Functional Partners:
ARF64994.1
Sulfate adenylyltransferase small subunit; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.902
ARF65166.1
Sulfate adenylyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
    
  0.902
ARF64993.1
Sulfate adenylyltransferase; May be the GTPase, regulating ATP sulfurylase activity. Belongs to the TRAFAC class translation factor GTPase superfamily. Classic translation factor GTPase family. CysN/NodQ subfamily.
     
  0.900
cysC
Adenylyl-sulfate kinase; Catalyzes the synthesis of activated sulfate.
    
  0.900
ARF65167.1
Hypothetical protein; Derived by automated computational analysis using gene prediction method: Protein Homology.
     
  0.900
ARF60753.1
Ion transporter; Derived by automated computational analysis using gene prediction method: Protein Homology.
       0.779
ARF64285.1
Helicase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
 
 0.736
thrS
threonine--tRNA ligase; Derived by automated computational analysis using gene prediction method: Protein Homology; Belongs to the class-II aminoacyl-tRNA synthetase family.
     
 0.675
rpoZ
DNA-directed RNA polymerase subunit omega; Promotes RNA polymerase assembly. Latches the N- and C- terminal regions of the beta' subunit thereby facilitating its interaction with the beta and alpha subunits.
 
 
  0.601
ARF60749.1
Phosphatidylinositol mannoside acyltransferase; Derived by automated computational analysis using gene prediction method: Protein Homology.
  
  
 0.595
Your Current Organism:
Streptomyces violaceoruber
NCBI taxonomy Id: 1935
Other names: ATCC 14980, ATCC 19816, ATCC 3355, Actinomyces violaceus-ruber, BCRC 11489, CBS 569.68, CCRC 11489, CCRC:11489, DSM 40049, IFO 12826, ISP 5049, JCM 4423, KCTC 9787, NBRC 12826, NRRL B-12594, NRRL B-2935, NRRL B-3025, NRRL B-3319, NRRL-ISP 5049, S. violaceoruber, Streptomyces violaceiruber, Streptomyces violaceus-ruber, UNIQEM 203, VKM Ac-726
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