STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011495_00741Unannotated protein. (358 aa)    
Predicted Functional Partners:
GCA_002011495_00446
Unannotated protein.
    
 0.896
GCA_002011495_00230
Unannotated protein.
    
  0.880
GCA_002011495_01441
Unannotated protein.
   
 
  0.880
GCA_002011495_00742
Unannotated protein.
     
 0.832
GCA_002011495_00743
Unannotated protein.
       0.803
GCA_002011495_00740
Unannotated protein.
       0.538
GCA_002011495_00411
Unannotated protein.
    
  0.514
GCA_002011495_01716
Unannotated protein.
    
 0.513
GCA_002011495_00311
Unannotated protein.
    
  0.504
GCA_002011495_00579
Unannotated protein.
    
  0.497
Your Current Organism:
Dehalococcoides sp. JdFR56
NCBI taxonomy Id: 1935049
Other names: D. sp. JdFR-56, Dehalococcoides sp. JdFR-56
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.