STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011495_01313Unannotated protein. (296 aa)    
Predicted Functional Partners:
GCA_002011495_01314
Unannotated protein.
 
  
 0.974
GCA_002011495_01688
Unannotated protein.
  
 
 
 0.843
GCA_002011495_00264
Unannotated protein.
 
  
 0.764
GCA_002011495_01031
Unannotated protein.
    
 0.746
GCA_002011495_01592
Unannotated protein.
    
 0.733
GCA_002011495_00783
Unannotated protein.
 
  
 0.650
GCA_002011495_01379
Unannotated protein.
    
 0.601
GCA_002011495_01383
Unannotated protein.
    
 0.601
GCA_002011495_00387
Unannotated protein.
    
 0.541
GCA_002011495_00873
Unannotated protein.
     
 0.507
Your Current Organism:
Dehalococcoides sp. JdFR56
NCBI taxonomy Id: 1935049
Other names: D. sp. JdFR-56, Dehalococcoides sp. JdFR-56
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.