STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011425_01308Unannotated protein. (479 aa)    
Predicted Functional Partners:
GCA_002011425_01786
Unannotated protein.
 
  0.610
GCA_002011425_01716
Unannotated protein.
  
  0.603
GCA_002011425_01300
Unannotated protein.
 
  0.601
GCA_002011425_01635
Unannotated protein.
  
  0.601
GCA_002011425_01858
Unannotated protein.
 
  0.599
GCA_002011425_00403
Unannotated protein.
  0.598
GCA_002011425_00402
Unannotated protein.
  
  0.585
GCA_002011425_01301
Unannotated protein.
  
  0.579
GCA_002011425_00883
Unannotated protein.
  
    0.574
GCA_002011425_00069
Unannotated protein.
  0.572
Your Current Organism:
Acetothermia bacterium JdFR48
NCBI taxonomy Id: 1935102
Other names: C. Acetothermia bacterium JdFR-48, Candidatus Acetothermia bacterium JdFR-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.