STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011425_01596Unannotated protein. (279 aa)    
Predicted Functional Partners:
GCA_002011425_01593
Unannotated protein.
  
    0.784
GCA_002011425_01594
Unannotated protein.
       0.773
GCA_002011425_01595
Unannotated protein.
       0.773
GCA_002011425_01597
Unannotated protein.
 
   
 0.733
GCA_002011425_00424
Unannotated protein.
  
  
 0.683
GCA_002011425_00361
Unannotated protein.
 
   
 0.656
GCA_002011425_01538
Unannotated protein.
  
    0.646
GCA_002011425_01539
Unannotated protein.
  
    0.644
GCA_002011425_00177
Unannotated protein.
 
    0.636
GCA_002011425_00423
Unannotated protein.
  
    0.517
Your Current Organism:
Acetothermia bacterium JdFR48
NCBI taxonomy Id: 1935102
Other names: C. Acetothermia bacterium JdFR-48, Candidatus Acetothermia bacterium JdFR-48
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.