STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002010725_01679Unannotated protein. (706 aa)    
Predicted Functional Partners:
GCA_002010725_01006
Unannotated protein.
  
  
 0.867
GCA_002010725_01680
Unannotated protein.
  
  
 0.836
GCA_002010725_01658
Unannotated protein.
 
  
  0.828
GCA_002010725_01699
Unannotated protein.
 
  
 0.807
GCA_002010725_00580
Unannotated protein.
  
     0.774
GCA_002010725_00063
Unannotated protein.
  
     0.773
GCA_002010725_01507
Unannotated protein.
  
     0.773
GCA_002010725_00050
Unannotated protein.
  
     0.772
GCA_002010725_01254
Unannotated protein.
 
     0.771
GCA_002010725_00981
Unannotated protein.
  
     0.770
Your Current Organism:
Aminicenantes bacterium JdFR80
NCBI taxonomy Id: 1935110
Other names: C. Aminicenantes bacterium JdFR-80, Candidatus Aminicenantes bacterium JdFR-80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.