STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002010725_02366Unannotated protein. (156 aa)    
Predicted Functional Partners:
GCA_002010725_02368
Unannotated protein.
 
 0.999
GCA_002010725_02370
Unannotated protein.
 0.999
GCA_002010725_02367
Unannotated protein.
  
 0.996
GCA_002010725_02369
Unannotated protein.
 
 
 0.990
GCA_002010725_02373
Unannotated protein.
    
 0.912
GCA_002010725_00150
Unannotated protein.
 
 
 0.878
GCA_002010725_00151
Unannotated protein.
 
  
 0.847
GCA_002010725_02372
Unannotated protein.
 
   
 0.833
GCA_002010725_02371
Unannotated protein.
       0.769
GCA_002010725_00991
Unannotated protein.
    
 0.665
Your Current Organism:
Aminicenantes bacterium JdFR80
NCBI taxonomy Id: 1935110
Other names: C. Aminicenantes bacterium JdFR-80, Candidatus Aminicenantes bacterium JdFR-80
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.