STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011075_00055Unannotated protein. (177 aa)    
Predicted Functional Partners:
GCA_002011075_00950
Unannotated protein.
    
 0.812
GCA_002011075_00056
Unannotated protein.
 
  
 0.783
GCA_002011075_01064
Unannotated protein.
  
  0.753
GCA_002011075_00057
Unannotated protein.
       0.732
GCA_002011075_00942
Unannotated protein.
   
  0.727
GCA_002011075_01055
Unannotated protein.
   
  0.727
GCA_002011075_01026
Unannotated protein.
  
  0.722
GCA_002011075_00880
Unannotated protein.
  
  0.719
GCA_002011075_00939
Unannotated protein.
   
  0.715
GCA_002011075_01056
Unannotated protein.
  
 0.709
Your Current Organism:
Geothermarchaeota archaeon
NCBI taxonomy Id: 1935120
Other names: C. Geothermarchaeota archaeon JdFR-13, Candidatus Geothermarchaeota archaeon JdFR-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.