STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011075_00276Unannotated protein. (233 aa)    
Predicted Functional Partners:
GCA_002011075_00275
Unannotated protein.
  
    0.624
GCA_002011075_00881
Unannotated protein.
    
  0.568
GCA_002011075_00909
Unannotated protein.
    
  0.561
GCA_002011075_01053
Unannotated protein.
    
  0.538
GCA_002011075_01440
Unannotated protein.
    
  0.534
GCA_002011075_01648
Unannotated protein.
    
  0.533
GCA_002011075_00211
Unannotated protein.
  
  
 0.431
GCA_002011075_00274
Unannotated protein.
       0.415
GCA_002011075_00926
Unannotated protein.
  
    0.415
Your Current Organism:
Geothermarchaeota archaeon
NCBI taxonomy Id: 1935120
Other names: C. Geothermarchaeota archaeon JdFR-13, Candidatus Geothermarchaeota archaeon JdFR-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.