STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011075_00458Unannotated protein. (259 aa)    
Predicted Functional Partners:
GCA_002011075_00520
Unannotated protein.
   
 
 0.982
GCA_002011075_00500
Unannotated protein.
   
  
 0.807
GCA_002011075_00042
Unannotated protein.
   
  
 0.786
GCA_002011075_00053
Unannotated protein.
  
  
 0.784
GCA_002011075_01669
Unannotated protein.
 
  
 0.754
GCA_002011075_00530
Unannotated protein.
 
  
 0.753
GCA_002011075_01014
Unannotated protein.
   
    0.753
GCA_002011075_00951
Unannotated protein.
   
   0.749
GCA_002011075_00496
Unannotated protein.
  
    0.725
GCA_002011075_01015
Unannotated protein.
   
    0.716
Your Current Organism:
Geothermarchaeota archaeon
NCBI taxonomy Id: 1935120
Other names: C. Geothermarchaeota archaeon JdFR-13, Candidatus Geothermarchaeota archaeon JdFR-13
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.