STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011125_00683Unannotated protein. (308 aa)    
Predicted Functional Partners:
GCA_002011125_00681
Unannotated protein.
       0.532
GCA_002011125_00682
Unannotated protein.
       0.532
GCA_002011125_00684
Unannotated protein.
       0.531
GCA_002011125_00685
Unannotated protein.
       0.520
GCA_002011125_00686
Unannotated protein.
       0.504
GCA_002011125_00687
Unannotated protein.
       0.498
GCA_002011125_00688
Unannotated protein.
       0.498
GCA_002011125_00689
Unannotated protein.
       0.491
GCA_002011125_00690
Unannotated protein.
       0.491
GCA_002011125_00679
Unannotated protein.
       0.489
Your Current Organism:
Hydrothermarchaeota archaeon
NCBI taxonomy Id: 1935129
Other names: C. Hydrothermarchaeota archaeon JdFR-18, Candidatus Hydrothermarchaeota archaeon JdFR-18
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.