STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002010075_00523Unannotated protein. (163 aa)    
Predicted Functional Partners:
GCA_002010075_00402
Unannotated protein.
  
 0.964
GCA_002010075_00403
Unannotated protein.
  
 0.964
GCA_002010075_00027
Unannotated protein.
    
 0.783
GCA_002010075_00810
Unannotated protein.
 
  0.745
GCA_002010075_00471
Unannotated protein.
  
  0.737
GCA_002010075_00474
Unannotated protein.
  
  0.729
GCA_002010075_01029
Unannotated protein.
  
  0.729
GCA_002010075_00019
Unannotated protein.
   
  0.723
GCA_002010075_01150
Unannotated protein.
  
  0.723
GCA_002010075_00728
Unannotated protein.
  
  0.722
Your Current Organism:
Methanomicrobia archaeon JdFR19
NCBI taxonomy Id: 1935140
Other names: M. archaeon JdFR-19, Methanomicrobia archaeon JdFR-19
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.