STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GCA_002011795_00243Unannotated protein. (751 aa)    
Predicted Functional Partners:
GCA_002011795_00185
Unannotated protein.
  
 0.999
GCA_002011795_00244
Unannotated protein.
 
 0.999
GCA_002011795_00371
Unannotated protein.
  
 0.999
GCA_002011795_00372
Unannotated protein.
  
 0.999
GCA_002011795_01218
Unannotated protein.
  
 0.999
GCA_002011795_00242
Unannotated protein.
 
0.998
GCA_002011795_00272
Unannotated protein.
   
 0.997
GCA_002011795_00680
Unannotated protein.
   
 0.997
GCA_002011795_00241
Unannotated protein.
 
 
 0.966
GCA_002011795_00240
Unannotated protein.
 
 
 0.955
Your Current Organism:
Nitrospirae bacterium JdFR88
NCBI taxonomy Id: 1935149
Other names: N. bacterium JdFR-88, Nitrospirae bacterium JdFR-88
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.