STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
htrAPutative serine protease HtrA. (502 aa)    
Predicted Functional Partners:
AQT67264.1
Peptidase Do.
 
    
0.834
degP1
Putative periplasmic serine endoprotease DegP-like precursor.
  
     0.629
dsbD
Thiol:disulfide interchange protein DsbD precursor.
     
 0.536
AQT67008.1
Cyclic 3',5'-adenosine monophosphate phosphodiesterase.
  
 
   0.491
leuS
Leucine--tRNA ligase; Belongs to the class-I aminoacyl-tRNA synthetase family.
  
    0.466
AQT67009.1
Farnesyl diphosphate synthase; Belongs to the FPP/GGPP synthase family.
 
     0.460
AQT67471.1
Ankyrin repeat protein.
  
 0.402
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.