STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT67674.1RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (177 aa)    
Predicted Functional Partners:
AQT68058.1
FecR protein.
  
   0.801
AQT67885.1
FecR protein.
  
   0.800
AQT69764.1
FecR protein.
  
   0.794
AQT67673.1
FecR protein.
       0.773
AQT67874.1
Hypothetical protein.
  
     0.622
AQT67672.1
Hypothetical protein.
       0.584
AQT68076.1
Hypothetical protein.
  
 
   0.567
AQT67875.1
Hypothetical protein.
 
     0.542
AQT67876.1
Putative subtilase-type serine protease precursor.
  
     0.536
AQT69191.1
Putative Ig domain protein.
  
 
   0.536
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.