STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT67886.1Hypothetical protein. (513 aa)    
Predicted Functional Partners:
AQT67877.1
CotH protein.
 
     0.699
AQT67883.1
Type I secretion outer membrane protein, TolC family.
 
     0.630
cnrH_1
RNA polymerase sigma factor CnrH; Belongs to the sigma-70 factor family. ECF subfamily.
       0.603
AQT67885.1
FecR protein.
       0.603
AQT69557.1
Bacterial alpha-L-rhamnosidase.
  
     0.581
AQT69215.1
Immunoglobulin I-set domain protein.
 
     0.550
AQT67887.1
Hypothetical protein.
      
0.508
AQT70260.1
Outer membrane channel protein.
  
     0.488
cotH
Inner spore coat protein H.
 
     0.454
AQT67888.1
Putative exopolysaccharide biosynthesis protein.
 
    
0.451
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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