STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68068.1Hypothetical protein. (1279 aa)    
Predicted Functional Partners:
yhdG
Putative amino acid permease YhdG.
   
 0.933
AQT68076.1
Hypothetical protein.
  
   
 0.736
AQT68203.1
Hypothetical protein.
  
  
 0.722
AQT68964.1
PEP-CTERM protein-sorting domain-containing protein.
  
     0.684
AQT69871.1
Tfp pilus assembly protein FimT.
  
   
 0.659
treS
Trehalose synthase/amylase TreS.
  
 
 0.639
AQT69688.1
Hypothetical protein.
  
     0.501
AQT70019.1
Pectate lyase superfamily protein.
  
   
 0.487
AQT68069.1
Hypothetical protein.
 
    
0.480
AQT68185.1
Immunoglobulin I-set domain protein.
  
     0.468
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.