STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
hndCNADP-reducing hydrogenase subunit HndC. (597 aa)    
Predicted Functional Partners:
hndA_1
NADP-reducing hydrogenase subunit HndA.
 0.999
yccM_1
Putative electron transport protein YccM.
  
 0.998
hndD
NADP-reducing hydrogenase subunit HndC.
 
 
 
 0.995
hndA_2
NADP-reducing hydrogenase subunit HndA.
 
0.988
AQT68976.1
NADH:ubiquinone oxidoreductase 24 kD subunit.
  
 0.988
atpC_2
F-ATPase epsilon subunit; Produces ATP from ADP in the presence of a proton gradient across the membrane.
   
  
 0.975
folK
2-amino-4-hydroxy-6- hydroxymethyldihydropteridine pyrophosphokinase.
  
 0.955
AQT68974.1
Iron hydrogenase 1.
 
 
 
 0.950
ytpA
Phospholipase YtpA.
  
 
 0.944
gltD
Glutamate synthase [NADPH] small chain.
    
 0.940
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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