STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
fliA_1Sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released. (260 aa)    
Predicted Functional Partners:
sigD
Sigma-28; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 
0.922
fliA_2
Sigma-F factor; Sigma factors are initiation factors that promote the attachment of RNA polymerase to specific initiation sites and are then released.
  
  
 
0.910
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
 
  
 0.889
flgE
Flagellar hook protein FlgE.
 
  
 0.863
fliG
Flagellar motor switch protein FliG.
 
  
 0.832
fliN
Flagellar motor switch protein FliN.
 
  
 0.832
flgC
Putative proximal rod protein.
 
 
 0.828
pomA
Chemotaxis protein PomA.
 
  
 0.815
AQT69310.1
Anti-sigma F factor.
 
 
 0.805
flgD
Basal-body rod modification protein FlgD.
 
  
 0.777
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.