STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68419.1Marine proteobacterial sortase target protein. (303 aa)    
Predicted Functional Partners:
ykuD
Putative L,D-transpeptidase YkuD.
 
     0.825
AQT68417.1
Putative 5-formyltetrahydrofolate cyclo-ligase; Belongs to the 5-formyltetrahydrofolate cyclo-ligase family.
       0.773
rarA
Replication-associated recombination protein A.
 
     0.709
rpoA_1
DNA-directed RNA polymerase subunit alpha.
  
     0.688
exbB_1
Biopolymer transport protein ExbB.
       0.651
AQT68421.1
Protein TolR.
       0.651
AQT69810.1
Pectate lyase superfamily protein.
  
     0.630
AQT68160.1
Putative transporter.
  
     0.585
AQT69313.1
MazG nucleotide pyrophosphohydrolase domain protein.
  
     0.565
AQT69700.1
Tetratricopeptide repeat protein.
  
     0.561
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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