STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68513.1Hypothetical protein. (295 aa)    
Predicted Functional Partners:
AQT68514.1
Exodeoxyribonuclease III (xth).
       0.732
AQT68639.1
Dinitrogenase iron-molybdenum cofactor.
 
     0.616
AQT68640.1
Electron transport complex protein RnfB.
 
     0.551
AQT68641.1
ParA-like protein.
 
     0.533
atsA_15
Arylsulfatase.
       0.491
fumB
Fumarate hydratase class I, anaerobic.
       0.466
AQT68642.1
Dinitrogenase iron-molybdenum cofactor.
 
     0.465
AQT68303.1
tRNA-modifying enzyme.
 
     0.437
AQT69367.1
FeoA domain protein.
  
     0.429
AQT68643.1
Hypothetical protein.
 
     0.421
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.