STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
inlA_3Internalin-A precursor. (436 aa)    
Predicted Functional Partners:
inlA_2
Internalin-A precursor.
 
     0.774
AQT68655.1
Transposase.
       0.613
AQT69445.1
Photosystem I assembly protein Ycf3.
  
     0.578
sppA
Putative signal peptide peptidase SppA.
       0.483
yrrB_4
TPR repeat-containing protein YrrB.
  
     0.481
AQT67770.1
Gluconolactonase.
  
     0.454
AQT67821.1
Type III secretion low calcium response chaperone LcrH/SycD.
  
     0.451
AQT67771.1
Low-density lipoprotein receptor repeat class B.
  
     0.445
AQT68140.1
Hypothetical protein.
 
     0.439
yrrB_1
TPR repeat-containing protein YrrB.
  
     0.402
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.