STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
mngB_2Mannosylglycerate hydrolase. (1496 aa)    
Predicted Functional Partners:
chiA1_1
Chitinase A1 precursor.
 
  
0.811
AQT68103.1
Alpha-glucosidase.
  
     0.635
AQT69557.1
Bacterial alpha-L-rhamnosidase.
  
    0.605
xylE_1
D-xylose transporter; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
  
    0.503
AQT68757.1
Uroporphyrinogen decarboxylase (URO-D); Belongs to the uroporphyrinogen decarboxylase family.
       0.495
AQT68497.1
Anaerobic glycerol-3-phosphate dehydrogenase subunit B.
 
     0.489
AQT67447.1
Bacterial alpha-L-rhamnosidase.
  
     0.467
AQT68090.1
Bacterial alpha-L-rhamnosidase.
  
     0.461
AQT68344.1
Putative PEP-CTERM system TPR-repeat lipoprotein.
  
     0.409
AQT69759.1
Beta-xylosidase; Belongs to the glycosyl hydrolase 43 family.
  
     0.407
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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