STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
rbsRRibose operon repressor. (389 aa)    
Predicted Functional Partners:
araR_2
Arabinose metabolism transcriptional repressor.
  
 
 
 0.769
ccpA
Glucose-resistance amylase regulator.
  
     0.767
gltB_1
Ferredoxin-dependent glutamate synthase 1.
    
 
 0.732
mngB_4
Mannosylglycerate hydrolase.
 
    0.549
xylR_4
Xylose operon regulatory protein.
  
    0.499
ptsH
Phosphocarrier protein HPr.
   
 
 0.473
xylR_3
Xylose operon regulatory protein.
  
    0.445
nagC
N-acetylglucosamine repressor.
 
   
 0.438
srlR
Glucitol operon repressor.
  
   
 0.430
xylR_5
Xylose operon regulatory protein.
  
    0.427
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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