STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68790.1Hypothetical protein. (544 aa)    
Predicted Functional Partners:
AQT68792.1
TonB-dependent receptor.
 
   
 0.871
AQT67186.1
Outer membrane assembly lipoprotein YfiO.
 
 
 0.691
bamA
Outer membrane protein Omp85.
  
 
 0.662
AQT68798.1
Transport protein TonB.
 
     0.604
exbB_2
Biopolymer transport protein ExbB.
  
     0.603
sglT_5
Na(+)/glucose symporter; Belongs to the sodium:solute symporter (SSF) (TC 2.A.21) family.
  
     0.603
AQT69810.1
Pectate lyase superfamily protein.
 
     0.598
AQT69806.1
Beta-phosphoglucomutase family hydrolase.
  
     0.589
AQT68799.1
Tetratricopeptide repeat protein.
 
     0.562
AQT69633.1
Hypothetical protein.
  
     0.549
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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