STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68799.1Tetratricopeptide repeat protein. (486 aa)    
Predicted Functional Partners:
AQT68798.1
Transport protein TonB.
 
     0.945
exbB_2
Biopolymer transport protein ExbB.
 
     0.881
exbB_3
Biopolymer transport protein ExbB.
 
     0.881
AQT68797.1
Biopolymer transport protein ExbD.
 
     0.875
AQT69806.1
Beta-phosphoglucomutase family hydrolase.
  
     0.757
AQT68792.1
TonB-dependent receptor.
 
     0.704
AQT69810.1
Pectate lyase superfamily protein.
  
     0.626
AQT69269.1
Putative membrane protein.
  
     0.617
AQT69278.1
Cytochrome c551/c552.
  
     0.587
AQT69700.1
Tetratricopeptide repeat protein.
  
     0.587
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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