STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68832.1ComEC family competence protein. (846 aa)    
Predicted Functional Partners:
AQT69687.1
Hef nuclease.
 
  
 0.917
AQT68550.1
DNA utilization protein GntX.
 
  
 0.907
outO
Pectic enzymes secretion protein OutO.
  
  
 0.761
comM
Competence protein ComM.
 
  
 0.704
serS
Serine--tRNA ligase.
  
    0.668
ttrR
Tetrathionate response regulatory protein TtrR.
  
  
 0.656
recJ
Single-stranded-DNA-specific exonuclease RecJ.
 
   
 0.633
pheT
Phenylalanine--tRNA ligase beta subunit; Belongs to the phenylalanyl-tRNA synthetase beta subunit family. Type 1 subfamily.
 
   
 0.624
comEA
ComE operon protein 1.
 
  
 0.622
cph1_2
Phytochrome-like protein cph1.
  
  
 0.587
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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