STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT68904.1Hypothetical protein. (203 aa)    
Predicted Functional Partners:
pilQ_1
Type IV pilus biogenesis and competence protein PilQ precursor.
       0.714
AQT68906.1
Tetratricopeptide repeat protein.
       0.694
phoR_1
Alkaline phosphatase synthesis sensor protein PhoR.
       0.654
AQT68901.1
Type IV pilus assembly protein PilM.
       0.588
AQT68902.1
Hypothetical protein.
       0.588
AQT68903.1
Pilus assembly protein, PilO.
       0.588
AQT68900.1
Hypothetical protein.
       0.576
yycF_2
Transcriptional regulatory protein YycF.
       0.540
rpfG
Cyclic di-GMP phosphodiesterase response regulator RpfG.
       0.482
AQT68910.1
Anti-anti-sigma factor.
       0.482
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.