STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69076.1Laminin G domain protein. (1570 aa)    
Predicted Functional Partners:
AQT68078.1
Hypothetical protein.
  
     0.711
AQT68077.1
Hypothetical protein.
  
     0.702
AQT68076.1
Hypothetical protein.
  
     0.679
AQT69073.1
RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily.
 
     0.648
AQT67672.1
Hypothetical protein.
  
     0.639
AQT69871.1
Tfp pilus assembly protein FimT.
  
     0.632
AQT68502.1
Hypothetical protein.
  
     0.612
AQT67705.1
Hypothetical protein.
  
     0.608
AQT69075.1
Putative major pilin subunit.
       0.586
AQT69074.1
FecR protein.
       0.585
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.