STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
kinD_2Sporulation kinase D. (256 aa)    
Predicted Functional Partners:
pleD_3
Stalked cell differentiation-controlling protein.
   0.990
cph1_2
Phytochrome-like protein cph1.
 
0.877
pknB
Serine/threonine-protein kinase PknB.
 
  
   0.877
luxQ_2
Autoinducer 2 sensor kinase/phosphatase LuxQ.
 
0.875
phoP
Alkaline phosphatase synthesis transcriptional regulatory protein PhoP.
 
   0.861
tcrX
Putative transcriptional regulatory protein TcrX.
  
   0.858
yycF_2
Transcriptional regulatory protein YycF.
  
   0.858
mprA
Mycobacterial persistence regulator A.
  
   0.858
yycF_1
Transcriptional regulatory protein YycF.
  
   0.857
cseB
Transcriptional regulatory protein CseB.
  
   0.855
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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