STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69196.1RNA polymerase sigma factor; Belongs to the sigma-70 factor family. ECF subfamily. (181 aa)    
Predicted Functional Partners:
AQT69195.1
FecR protein.
  
   0.805
AQT68058.1
FecR protein.
  
   0.766
AQT67885.1
FecR protein.
  
   0.759
AQT69764.1
FecR protein.
  
   0.741
AQT69194.1
Type II secretion system protein G.
 
     0.716
AQT69191.1
Putative Ig domain protein.
 
 
   0.611
AQT69193.1
Hypothetical protein.
       0.597
AQT67876.1
Putative subtilase-type serine protease precursor.
  
     0.508
AQT67874.1
Hypothetical protein.
  
     0.496
AQT69177.1
Hypothetical protein.
  
 
   0.454
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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