STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69216.1Putative major pilin subunit. (281 aa)    
Predicted Functional Partners:
AQT69217.1
FecR protein.
       0.741
sigX_1
RNA polymerase sigma factor SigX; Belongs to the sigma-70 factor family. ECF subfamily.
       0.741
xcpT_8
PilD-dependent protein PddA.
  
     0.734
AQT67559.1
Protein restricted to Verrucomicrobia-Planctomycetes group.
  
     0.683
AQT67380.1
Putative methyltransferase (contains TPR repeat).
  
     0.667
rpmB
50S ribosomal protein L28; Belongs to the bacterial ribosomal protein bL28 family.
  
     0.666
AQT67186.1
Outer membrane assembly lipoprotein YfiO.
 
     0.561
AQT69215.1
Immunoglobulin I-set domain protein.
       0.543
AQT67883.1
Type I secretion outer membrane protein, TolC family.
  
     0.534
AQT69423.1
Type I secretion outer membrane protein, TolC family.
  
     0.518
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
Server load: low (30%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.