STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
pimAGDP-mannose-dependent alpha-(1-2)-phosphatidylinositol mannosyltransferase. (376 aa)    
Predicted Functional Partners:
AQT69233.1
Beta-1,4-mannooligosaccharide phosphorylase.
 
     0.913
mfpsA
Mannosylfructose-phosphate synthase.
  
     0.750
pimB_2
GDP-mannose-dependent alpha-(1-6)-phosphatidylinositol monomannoside mannosyltransferase.
  
     0.747
AQT69235.1
Beta-1,4-mannooligosaccharide phosphorylase.
 
     0.730
treZ
Malto-oligosyltrehalose trehalohydrolase.
  
 0.477
AQT67267.1
Beta-1,4-mannooligosaccharide phosphorylase.
  
     0.424
wcaJ
UDP-glucose:undecaprenyl-phosphate glucose-1-phosphate transferase.
  
  
 0.406
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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