STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
amtB_1Ammonia transporter. (462 aa)    
Predicted Functional Partners:
glnB
Nitrogen regulatory protein P-II; Belongs to the P(II) protein family.
 
 0.999
gltB_1
Ferredoxin-dependent glutamate synthase 1.
 
  
 0.739
fixL
Sensor protein FixL.
 
 
 
 0.557
barA_2
Signal transduction histidine-protein kinase BarA.
 
 
 
 0.464
dmdA_2
2,3-dimethylmalate dehydratase large subunit.
  
 
 0.456
pleD_2
Stalked cell differentiation-controlling protein.
 
    
 0.450
merA
Mercuric reductase.
     
 0.432
barA_1
Signal transduction histidine-protein kinase BarA.
 
 
 0.428
glnA
Glutamine synthetase.
     
 0.427
AQT69239.1
Radical SAM/Cys-rich domain protein.
  
  
 0.411
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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