STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
iolG_6Inositol 2-dehydrogenase. (456 aa)    
Predicted Functional Partners:
AQT69275.1
Xylose isomerase-like TIM barrel.
 
    0.857
ycjS_1
Putative oxidoreductase YcjS.
 
     0.774
AQT67413.1
Hypothetical protein.
  
     0.765
AQT68675.1
Hypothetical protein.
  
     0.763
AQT67102.1
Hypothetical protein.
  
     0.760
AQT68073.1
Hypothetical protein.
  
     0.760
hyi
Hydroxypyruvate isomerase.
 
    0.701
AQT69278.1
Cytochrome c551/c552.
 
     0.671
ydgJ
Putative oxidoreductase YdgJ.
 
     0.616
ligC_3
4-carboxy-2-hydroxymuconate-6-semialdehyde dehydrogenase.
 
    
0.607
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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