STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
AQT69310.1Anti-sigma F factor. (142 aa)    
Predicted Functional Partners:
rsbV
Anti-anti-sigma-B factor; Belongs to the anti-sigma-factor antagonist family.
 
 
 0.974
rsbU_1
Phosphoserine phosphatase RsbU.
 
 
 0.939
AQT69371.1
Putative anti-sigma factor antagonist.
 
 
 0.917
rsbU_3
Phosphoserine phosphatase RsbU.
 
 
 0.916
rsbU_2
Phosphoserine phosphatase RsbU.
 
 
 0.905
AQT66891.1
Flagellar basal body rod protein FlgB; Structural component of flagellum, the bacterial motility apparatus. Part of the rod structure of flagellar basal body.
   
    0.895
fliG
Flagellar motor switch protein FliG.
   
    0.895
AQT66899.1
Phosphodiesterase.
   
    0.895
pomA
Chemotaxis protein PomA.
   
    0.895
flgK
Flagellar hook-associated protein 1; Belongs to the flagella basal body rod proteins family.
   
    0.895
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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