STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
oppDStage 0 sporulation protein KD; Belongs to the ABC transporter superfamily. (348 aa)    
Predicted Functional Partners:
dppC
Dipeptide transport system permease protein DppC.
 
 0.999
oppA_1
Stage 0 sporulation protein KA.
 
 0.995
oppA_3
Stage 0 sporulation protein KA.
 
 0.993
gsiC
Glutathione transport system permease protein GsiC.
 
 0.990
oppF
Stage 0 sporulation protein KE; Belongs to the ABC transporter superfamily.
 
  
 
0.980
gsiB
Glutathione-binding protein GsiB precursor.
 
  
 0.951
oppA_2
Stage 0 sporulation protein KA.
 
  
 0.940
ylmA_2
Putative ABC transporter ATP-binding protein YlmA.
 
    
0.880
lptB
Lipopolysaccharide export system ATP-binding protein LptB.
 
     
0.840
drrA
Doxorubicin resistance ATP-binding protein DrrA.
     
0.760
Your Current Organism:
Anaerohalosphaera lusitana
NCBI taxonomy Id: 1936003
Other names: A. lusitana, Anaerohalosphaera lusitana Pradel et al., DSM 103484, JCM 31926, KCTC 15600, Phycisphaerae bacterium ST-NAGAB-D1, strain ST-NAGAB-D1
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